PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041960.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 262aa    MW: 28368.2 Da    PI: 8.1064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041960.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08115162455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5AG041960.6 115 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 162
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
SDPAWAYGAN ARKRKAPAAG AGKGKETASC FAKFGLQMGE PTGPDSKKCK IEDETVRPKV  60
EEEAATATAS DGSAGGERGR KQAKGKGSKS KQPAADEPPR DYVHVRARRG QATDSHSLAE  120
RVRREKITLK MKMLQDLVPG CNKVIGKALM LDEIINYVQS LQQQVEFLSM KLSTVNPQLD  180
FDTLSNLLHK DMNQALGPSA STVFPLESAG TVYPLCDQAD LYQSFSSGAM ENQCSMGLLD  240
MALPPAPQYP FQKQVTVDCL EN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11250RKRKAPAAGAGKGKETASCFAKFGLQMGEPTGPDSKKCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-49bHLH family protein