PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG041960.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 369aa MW: 38816.4 Da PI: 4.9245

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG041960.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.7	2e-08	193	240	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i ++ L++l+P + +k Ka +L + ++Y++sLq TRIDC5AG041960.4 193 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 240 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MDGDYVSGLL MGSAGLDFGV PGLDAGFFET LCGGAGAAGL AAMFGDRAAG MPGFGGNGGQ 60 FGAAEGGGGG ELGAASREGS SVSDPAWAYG ANARKRKAPA AGAGKGKETA SCFAKMGEPT 120 GPDSKKCKIE DETVRPKVEE EAATATASDG SAGGERGRKQ AKGKGSKSKQ PAADEPPRDY 180 VHVRARRGQA TDSHSLAERV RREKITLKMK MLQDLVPGCN KVIGKALMLD EIINYVQSLQ 240 QQVEFLSMKL STVNPQLDFD TLSNLLHKDM NQALGPSAST VFPLESAGTV YPLCDQADLY 300 QSFSSGAMEN QCSMGLLDMA LPPAPQYPFQ KQQQDFWEAS AQNGLHMDHE QSQENAGQLQ 360 AADHPEIEF

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MDGDYVSGLL MGSAGLDFGV PGLDAGFFET LCGGAGAAGL AAMFGDRAAG MPGFGGNGGQ  60
FGAAEGGGGG ELGAASREGS SVSDPAWAYG ANARKRKAPA AGAGKGKETA SCFAKMGEPT  120
GPDSKKCKIE DETVRPKVEE EAATATASDG SAGGERGRKQ AKGKGSKSKQ PAADEPPRDY  180
VHVRARRGQA TDSHSLAERV RREKITLKMK MLQDLVPGCN KVIGKALMLD EIINYVQSLQ  240
QQVEFLSMKL STVNPQLDFD TLSNLLHKDM NQALGPSAST VFPLESAGTV YPLCDQADLY  300
QSFSSGAMEN QCSMGLLDMA LPPAPQYPFQ KQQQDFWEAS AQNGLHMDHE QSQENAGQLQ  360
AADHPEIEF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	128	RKRKAPAAGAGKGKETASCFAKMGEPTGPDSKKCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG041960.4