PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 91aa    MW: 10211.3 Da    PI: 8.9095
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.5e-092064344
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                       W++ E +l+ da + +G g   +W +++r mg ++t+ +++ ++
  TRIDC5AG041880.1 20 EWSKKENKLFEDALAYYGEGtpdRWLKVSRAMGGTKTADEVRRHY 64
                      5*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
IQLEMSSGSR SSSRGGANAE WSKKENKLFE DALAYYGEGT PDRWLKVSRA MGGTKTADEV  60
RRHYEILDGD IKLIESGRVP FPKYNTQGAW N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-24MYB_related family protein