PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG040410.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 600aa MW: 64379.7 Da PI: 5.6833

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG040410.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	6.9e-33	425	483	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe TRIDC5AG040410.9 425 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHE 483 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MAGTSDRGSL MEDWMAMPPT PSPRTLLSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG 60 ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT 120 SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVAPE ANSTMPPDST 180 FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK 240 PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS PPPNRRSGIP LSQINDQQVH VLEKPGSHAG 300 LNTASLWENG KSECIQDMQG VEGRPAAGPP VSAYGDTSIM ESQDAADVSS TLSNEIDRAT 360 QGTISLDCDV GEDETESKRR KLDALAAVTI PTATTTSSID MVAAASRAVR EPRVVVQTTS 420 EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTHQGCSVRK HVERASHDLK SVITTYEGKH 480 NHEVPAARNS GNAGSGSGSA TASAPQANLS HRRQEQAQGS YPQFGGATPF GSFGLPPRGH 540 LGAAGNFHFG MAPPGMSMPP MPAAHHPSMM QGYQGLMMQE GQMKAEPDQQ SGFAASSAYQ

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MAGTSDRGSL MEDWMAMPPT PSPRTLLSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG  60
ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT  120
SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVAPE ANSTMPPDST  180
FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK  240
PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS PPPNRRSGIP LSQINDQQVH VLEKPGSHAG  300
LNTASLWENG KSECIQDMQG VEGRPAAGPP VSAYGDTSIM ESQDAADVSS TLSNEIDRAT  360
QGTISLDCDV GEDETESKRR KLDALAAVTI PTATTTSSID MVAAASRAVR EPRVVVQTTS  420
EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTHQGCSVRK HVERASHDLK SVITTYEGKH  480
NHEVPAARNS GNAGSGSGSA TASAPQANLS HRRQEQAQGS YPQFGGATPF GSFGLPPRGH  540
LGAAGNFHFG MAPPGMSMPP MPAAHHPSMM QGYQGLMMQE GQMKAEPDQQ SGFAASSAYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	9e-66	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG040410.9