PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG040410.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 451aa MW: 49071.5 Da PI: 4.8593 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.8 | 9.7e-33 | 278 | 334 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+se+prsYY+Ct+++Cpvkkkvers+ d++++ei+Y+++Hnh+ TRIDC5AG040410.7 278 EDGYNWRKYGQKQVKSSEHPRSYYKCTHPDCPVKKKVERSQ-DGQITEIVYKSSHNHP 334 8****************************************.***************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MAGTSDRGSL MEDWMAMPPT PSPRTLLSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG 60 ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT 120 SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVAPE ANSTMPPDST 180 FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK 240 PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS ATNSNPAEDG YNWRKYGQKQ VKSSEHPRSY 300 YKCTHPDCPV KKKVERSQDG QITEIVYKSS HNHPLPPPNR RSGIPLSQIN DQQVHVLEKP 360 GSHAGLNTAS LWENGKSECI QDMQGVEGRP AAGPPVSAYG DTSIMESQDA ADVSSTLSNE 420 IDRATQGTIS LDCDVGEDET ESKRRLVSPS T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 8e-55 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG040410.7 |