PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG040090.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 143aa MW: 15846.1 Da PI: 5.2554

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG040090.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	168.7	7.2e-53	1	103	2	101
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 l++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdf TRIDC5AG040090.4 1 LQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDF 93 799**99999***************************************************************************** PP NF-YC 92 lvdivprdel 101 lvdivprd+ TRIDC5AG040090.4 94 LVDIVPRDDA 103 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
LQVFWAEQYR EIEATTDFKN HNLPLARIKK IMKADEDVRM IAAEAPVVFA RACEMFILEL 60 THRGWAHAEE NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDAKDAEAAA AAAMATAAAG 120 IPRPAAGVPA TDPSMAYYYV PQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	79	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	8e-60	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG040090.4