PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG040090.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 191aa MW: 20493.3 Da PI: 5.2554

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG040090.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.5	4e-53	45	148	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd TRIDC5AG040090.3 45 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 137 89****99999**************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdivprd+ TRIDC5AG040090.3 138 FLVDIVPRDDA 148 ******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
GAPVGYPPGA YPPPPGAPAA AYPPQLYAPP GAAAAQQAAA QQQQQLQVFW AEQYREIEAT 60 TDFKNHNLPL ARIKKIMKAD EDVRMIAAEA PVVFARACEM FILELTHRGW AHAEENKRRT 120 LQKSDIAAAI ARTEVFDFLV DIVPRDDAKD AEAAAAAAMA TAAAGIPRPA AGVPATDPSM 180 AYYYVPQQIV V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	124	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	3e-58	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG040090.3