PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG040090.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 206aa MW: 22051.1 Da PI: 5.0206

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG040090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.2	4.8e-53	63	166	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd TRIDC5AG040090.2 63 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 155 89****99999**************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdivprd+ TRIDC5AG040090.2 156 FLVDIVPRDDA 166 ******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
PEPMDPTKSS TPPPPPVLGA PVGYPPGAYP PPPGAPAAAY PPQLYAPPGA AAAQQAAAQQ 60 QQQLQVFWAE QYREIEATTD FKNHNLPLAR IKKIMKADED VRMIAAEAPV VFARACEMFI 120 LELTHRGWAH AEENKRRTLQ KSDIAAAIAR TEVFDFLVDI VPRDDAKDAE AAAAAAMATA 180 AAGIPRPAAG VPATDPSMAY YYVPQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	142	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	7e-58	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG040090.2