PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039280.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 430aa MW: 46686.9 Da PI: 8.2389

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039280.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.4	2.2e-17	164	213	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +h++ E+rRR++iN++f+ Lr+llP+ ++K +Ka+ L +++eYI+ Lq TRIDC5AG039280.4 164 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 213 578***********************8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
DEPVCPAHPS HVNSRLPAHS YPCATGTRTS SPRILGVPTG VWATFFCFVP CRCWVKGRDR 60 AKGVPVSVVH LAGHHHQWTL PYAGAGQAAT ASRKHPAERK RRGGGWFMDS GSRSSGGAGF 120 DDDDGLAARR EVSSSLQAEL AVRVDAKGGS CSGSGTDQLP NTPKSKHSAT EQRRRSKIND 180 RFQILRDLLP HTDQKRDKAT FLLEVIEYIR FLQEKAQKYE ASFPEWNQEN AKLLPWSNMY 240 FRSSWKNAQS KGQIAEDASP DPSQFIRNGA SPGFNITGKL DDNHTAVASA AISGAPDQAE 300 TDHMASVSCR SADTPTNIMN NVSPQSQPQW ADPSGVDDCA VNSGLLNNQQ LMIDEGTISV 360 SSQYSQELLN TLTHALQSSG IDLSQANISV QINLGKRAVK RPTAGQSSSF KEHTDLGPTN 420 NMMGHQQAML

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

DEPVCPAHPS HVNSRLPAHS YPCATGTRTS SPRILGVPTG VWATFFCFVP CRCWVKGRDR  60
AKGVPVSVVH LAGHHHQWTL PYAGAGQAAT ASRKHPAERK RRGGGWFMDS GSRSSGGAGF  120
DDDDGLAARR EVSSSLQAEL AVRVDAKGGS CSGSGTDQLP NTPKSKHSAT EQRRRSKIND  180
RFQILRDLLP HTDQKRDKAT FLLEVIEYIR FLQEKAQKYE ASFPEWNQEN AKLLPWSNMY  240
FRSSWKNAQS KGQIAEDASP DPSQFIRNGA SPGFNITGKL DDNHTAVASA AISGAPDQAE  300
TDHMASVSCR SADTPTNIMN NVSPQSQPQW ADPSGVDDCA VNSGLLNNQQ LMIDEGTISV  360
SSQYSQELLN TLTHALQSSG IDLSQANISV QINLGKRAVK RPTAGQSSSF KEHTDLGPTN  420
NMMGHQQAML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG039280.4