PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG039180.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 391aa    MW: 40885.5 Da    PI: 7.4499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG039180.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09246294355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIDC5AG039180.2 246 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 294
                       58*************************9....556*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MDMNESSEKG MEGNGSSGPG GGIPVEWQSQ FSGGGGFSAH HHQQHPHMMD SFASGMWPAA  60
SQHGAGFLAP VPGFLPPPGL GGHFPVDSGF IERAARSSCF VGPGSGGGMM GAGAFGGAGD  120
QHMGSAFGEG YLDHRRKEGG DKAEPELAGS GGVPSSEAAG GDCSSKGSDS KKRRRPSEVM  180
GGDQVQSSNV AADSANESAQ SKDKGEESSP ATGTTTGGKS KGKGAKESSE KEDYIHVRAR  240
RGQATNSHSL AERLRREKIS ERMKLLQDLV PGCSKVTGKA VMLDEIINYV QSLQRQVEFL  300
SMKLATVNPR LDLNIEGLLS KDLLRFPGVS SSSMGFSPEM MHPQLQLSQP GLMQGGAAAM  360
ANSDVFRRIM QAQLGAKDGS HSQLLQQRGR G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.12e-55bHLH family protein