PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 865aa MW: 93482.6 Da PI: 4.3237

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9.1e-05	98	120	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.6 98 ECKKCNLTFEDQSAYVQHQLSfH 120 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence
SSPRGHQFAT CREVSSYFMS LLGYVEAKPT TVQNNDVEVR DLSAVNTAGL HQQNDSTGDM 60 QSAVSATSVT LPIHNGDSQG QRQKPYKDEA PIEAVRKECK KCNLTFEDQS AYVQHQLSFH 120 QRKAKRRKVD KSVGLGVGKD GKLETQESQR TCEDKPGYFD HGVADVKSQG QSPAELFGGA 180 SSGDVGAQLS LAAAPCGLQE ITGLPEQAEE PSAGEPVSGH QKDLPQETTG LPQQEKALSA 240 TEPFAGHQKE HVDNSGDHEI HDGACHIAEE PLAFDVASNL GTCKSPEPEV HEHDSSKDLE 300 FSIADCSGSF DRSHEISKIP QDVPCTTDAP GEKSCADDPM DCADITLPKQ VPEHCDMLDH 360 KFRGFPGETG FNDQVENNPL SANLDEPDLS SNSMEVDNSK IACKFGDVLN STSSEYDKPV 420 VDQTDRGVTA LKNDAINIDD GMNIDVRIKE VNLNSCLDTI SSPVSGANCE TSNALHDGNR 480 SSILAQCFGA SSNDDNVCQD ESFVNQNNVS KAEIFVNQSN DMVYQSNLNM NPVSPPQISV 540 DYFTNCSMNS EIKNNDNRRD DNAKEQFVNS RNISSNEPGF DAEAYNNDIF TGAMAETSFA 600 QLNNAMNMKT DYSSCYSISD LNTLTGGTGT DGIDFHGMRS SFVSGSTSRS EPNELDFDIK 660 GSMLEALERS DSDLETQYNG GDPAIDSLPA AGTSGTSVDD FMSMHTNFGS LTSLVRSVEG 720 GPMSRLIQDQ CDLQLGFGAQ KQQIYPSFEE HLRMASAGAP QFGNMGRHNP MPVPVPVPEP 780 TLMLGYEPTL MLGYAPQFGS CPPVQLGWDL SKMVGVLQSV CVWCNTRFQH FGTAEQQNDS 840 VGFICPACKD KTSGHLGTLN NGSLL

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence

SSPRGHQFAT CREVSSYFMS LLGYVEAKPT TVQNNDVEVR DLSAVNTAGL HQQNDSTGDM  60
QSAVSATSVT LPIHNGDSQG QRQKPYKDEA PIEAVRKECK KCNLTFEDQS AYVQHQLSFH  120
QRKAKRRKVD KSVGLGVGKD GKLETQESQR TCEDKPGYFD HGVADVKSQG QSPAELFGGA  180
SSGDVGAQLS LAAAPCGLQE ITGLPEQAEE PSAGEPVSGH QKDLPQETTG LPQQEKALSA  240
TEPFAGHQKE HVDNSGDHEI HDGACHIAEE PLAFDVASNL GTCKSPEPEV HEHDSSKDLE  300
FSIADCSGSF DRSHEISKIP QDVPCTTDAP GEKSCADDPM DCADITLPKQ VPEHCDMLDH  360
KFRGFPGETG FNDQVENNPL SANLDEPDLS SNSMEVDNSK IACKFGDVLN STSSEYDKPV  420
VDQTDRGVTA LKNDAINIDD GMNIDVRIKE VNLNSCLDTI SSPVSGANCE TSNALHDGNR  480
SSILAQCFGA SSNDDNVCQD ESFVNQNNVS KAEIFVNQSN DMVYQSNLNM NPVSPPQISV  540
DYFTNCSMNS EIKNNDNRRD DNAKEQFVNS RNISSNEPGF DAEAYNNDIF TGAMAETSFA  600
QLNNAMNMKT DYSSCYSISD LNTLTGGTGT DGIDFHGMRS SFVSGSTSRS EPNELDFDIK  660
GSMLEALERS DSDLETQYNG GDPAIDSLPA AGTSGTSVDD FMSMHTNFGS LTSLVRSVEG  720
GPMSRLIQDQ CDLQLGFGAQ KQQIYPSFEE HLRMASAGAP QFGNMGRHNP MPVPVPVPEP  780
TLMLGYEPTL MLGYAPQFGS CPPVQLGWDL SKMVGVLQSV CVWCNTRFQH FGTAEQQNDS  840
VGFICPACKD KTSGHLGTLN NGSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	128	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.6