PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 932aa MW: 101303 Da PI: 4.4548

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.9e-05	298	320	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.3 298 ECKKCNLTFEDQSAYVQHQLSfH 320 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
AVFNESAGSR KQTFSRRRAA TNLPHNLTPT TASSSAVAAP TEEDSENRLI VFHLQQLFAR 60 DDPSYLPPPP PIPLQQLPPI PIPAPTIPVP APPVASVPIQ QLPDPDRDLT NPKGVAVDLA 120 RLAELVDPYG EEIRNRTAGL ALESELLGFM NELEGQWGSR RRRRKFVEAA IFGDHLPRGW 180 KLILGIKRKE RAAWINCRRY VSPRGHQFAT CREVSSYFMS LLGYVEAKPT TVQNNDVEVR 240 DLSAVNTAGL HQQNDSTGDM QSAVSATSVT LPIHNGDSQG QRQKPYKDEA PIEAVRKECK 300 KCNLTFEDQS AYVQHQLSFH QRKAKRRKVD KSVGLGVGKD GKLETQESQR TCEDKPGYFD 360 HGVADVKSQG QSPAELFGGA SSGDVGAQLS LAAAPCGLQE ITGLPEQAEE PSAGEPVSGH 420 QKDLPQETTG LPQQEKALSA TEPFAGHQKE HVDNSGDHEI HDGACHIAEE PLAFDVASNL 480 GTCKSPEPEV HEHDSSKDLE FSIADCSGSF DRSHEISKIP QDVPCTTDAP GEKSCADDPM 540 DCADITLPKQ VPEHCDMLDH KFRGFPGETG FNDQVENNPL SANLDEPDLS SNSMEVDNSK 600 IACKFGDVLN STSSEYDKPV VDQTDRGVTA LKNDAINIDD GMNIDVRIKE VNLNSCLDTI 660 SSPVSGANCE TSNALHDGNR SSILAQCFGA SSNDDNVCQD ESFVNQNNVS KAEIFVNQSN 720 DMVYQSNLNM NPVSPPQISV DYFTNCSMNS EIKNNDNRRD DNAKEQFVNS RNISSNEPGF 780 DAEAYNNDIF TGAMAETSFA QLNNAMNMKT DYSSCYSISD LNTLTGGTGT DGIDFHGMRS 840 SFVSGSTSRS EPNELDFDIK GSMLEALERS DSDLETQYNG GDPAIDSLPA AGTSGTSVDD 900 FMSMHTNFGS LTSLVRSVEG GPMSRLIQDQ CD

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

AVFNESAGSR KQTFSRRRAA TNLPHNLTPT TASSSAVAAP TEEDSENRLI VFHLQQLFAR  60
DDPSYLPPPP PIPLQQLPPI PIPAPTIPVP APPVASVPIQ QLPDPDRDLT NPKGVAVDLA  120
RLAELVDPYG EEIRNRTAGL ALESELLGFM NELEGQWGSR RRRRKFVEAA IFGDHLPRGW  180
KLILGIKRKE RAAWINCRRY VSPRGHQFAT CREVSSYFMS LLGYVEAKPT TVQNNDVEVR  240
DLSAVNTAGL HQQNDSTGDM QSAVSATSVT LPIHNGDSQG QRQKPYKDEA PIEAVRKECK  300
KCNLTFEDQS AYVQHQLSFH QRKAKRRKVD KSVGLGVGKD GKLETQESQR TCEDKPGYFD  360
HGVADVKSQG QSPAELFGGA SSGDVGAQLS LAAAPCGLQE ITGLPEQAEE PSAGEPVSGH  420
QKDLPQETTG LPQQEKALSA TEPFAGHQKE HVDNSGDHEI HDGACHIAEE PLAFDVASNL  480
GTCKSPEPEV HEHDSSKDLE FSIADCSGSF DRSHEISKIP QDVPCTTDAP GEKSCADDPM  540
DCADITLPKQ VPEHCDMLDH KFRGFPGETG FNDQVENNPL SANLDEPDLS SNSMEVDNSK  600
IACKFGDVLN STSSEYDKPV VDQTDRGVTA LKNDAINIDD GMNIDVRIKE VNLNSCLDTI  660
SSPVSGANCE TSNALHDGNR SSILAQCFGA SSNDDNVCQD ESFVNQNNVS KAEIFVNQSN  720
DMVYQSNLNM NPVSPPQISV DYFTNCSMNS EIKNNDNRRD DNAKEQFVNS RNISSNEPGF  780
DAEAYNNDIF TGAMAETSFA QLNNAMNMKT DYSSCYSISD LNTLTGGTGT DGIDFHGMRS  840
SFVSGSTSRS EPNELDFDIK GSMLEALERS DSDLETQYNG GDPAIDSLPA AGTSGTSVDD  900
FMSMHTNFGS LTSLVRSVEG GPMSRLIQDQ CD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	189	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
2	161	190	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
3	162	191	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
4	321	328	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.3