PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG039080.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 932aa MW: 101303 Da PI: 4.4548 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.6 | 9.9e-05 | 298 | 320 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.2 298 ECKKCNLTFEDQSAYVQHQLSfH 320 5******************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 932 aa Download sequence |
AVFNESAGSR KQTFSRRRAA TNLPHNLTPT TASSSAVAAP TEEDSENRLI VFHLQQLFAR 60 DDPSYLPPPP PIPLQQLPPI PIPAPTIPVP APPVASVPIQ QLPDPDRDLT NPKGVAVDLA 120 RLAELVDPYG EEIRNRTAGL ALESELLGFM NELEGQWGSR RRRRKFVEAA IFGDHLPRGW 180 KLILGIKRKE RAAWINCRRY VSPRGHQFAT CREVSSYFMS LLGYVEAKPT TVQNNDVEVR 240 DLSAVNTAGL HQQNDSTGDM QSAVSATSVT LPIHNGDSQG QRQKPYKDEA PIEAVRKECK 300 KCNLTFEDQS AYVQHQLSFH QRKAKRRKVD KSVGLGVGKD GKLETQESQR TCEDKPGYFD 360 HGVADVKSQG QSPAELFGGA SSGDVGAQLS LAAAPCGLQE ITGLPEQAEE PSAGEPVSGH 420 QKDLPQETTG LPQQEKALSA TEPFAGHQKE HVDNSGDHEI HDGACHIAEE PLAFDVASNL 480 GTCKSPEPEV HEHDSSKDLE FSIADCSGSF DRSHEISKIP QDVPCTTDAP GEKSCADDPM 540 DCADITLPKQ VPEHCDMLDH KFRGFPGETG FNDQVENNPL SANLDEPDLS SNSMEVDNSK 600 IACKFGDVLN STSSEYDKPV VDQTDRGVTA LKNDAINIDD GMNIDVRIKE VNLNSCLDTI 660 SSPVSGANCE TSNALHDGNR SSILAQCFGA SSNDDNVCQD ESFVNQNNVS KAEIFVNQSN 720 DMVYQSNLNM NPVSPPQISV DYFTNCSMNS EIKNNDNRRD DNAKEQFVNS RNISSNEPGF 780 DAEAYNNDIF TGAMAETSFA QLNNAMNMKT DYSSCYSISD LNTLTGGTGT DGIDFHGMRS 840 SFVSGSTSRS EPNELDFDIK GSMLEALERS DSDLETQYNG GDPAIDSLPA AGTSGTSVDD 900 FMSMHTNFGS LTSLVRSVEG GPMSRLIQDQ CD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 189 | RRRRRKFVEAAIFGDHLPRGWKLILGIKRK |
2 | 161 | 190 | RRRRRKFVEAAIFGDHLPRGWKLILGIKRK |
3 | 162 | 191 | RRRRRKFVEAAIFGDHLPRGWKLILGIKRK |
4 | 321 | 328 | QRKAKRRK |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG039080.2 |