PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG038950.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 268aa MW: 28586.4 Da PI: 4.4979

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG038950.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.2	3.2e-19	51	104	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq+++Le+ Fe ++++ e++++LA+ lgL+ rqV vWFqNrRa++k TRIDC5AG038950.3 51 KKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWK 104 45689************************************************9 PP
2	HD-ZIP_I/II	133.1	1e-42	50	142	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls+eqv++LE+sFe e+kLeperK++lar+LglqprqvavWFqnrRAR+ktkqlE+dy+aL+++ydal+ ++++L++++e+L +e+++ TRIDC5AG038950.3 50 EKKRRLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYNALRHSYDALRVDHDALRRDKEALLAEVRA 142 69*************************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MKRPGGGNPS SLHQMASPND YGVVGMEADG DAEEEMMACG GGGGGCGGGE KKRRLSAEQV 60 RALERSFEVE NKLEPERKAR LARDLGLQPR QVAVWFQNRR ARWKTKQLER DYNALRHSYD 120 ALRVDHDALR RDKEALLAEV RAAHGKLGDE EAAASFTSVK EEPAASDGPP PAGMGSSDSD 180 SSGVLNDTDA TGATPTEEAP APDMGTLLGG PGAAGAAAAG HGQVFLHGNF LKVEEDETGF 240 LDDEEPCGGF FADEPPLAWW TEPTDPWK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	82	ERKARLA
2	99	107	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	2e-42	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG038950.3