PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG037590.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 295aa    MW: 31907.7 Da    PI: 9.1046
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG037590.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1041.2e-32261212103
                       HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
      HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksFkkgkk 91 
                       Fl+k+y++++d+++++++sw  ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+Y  gF+kv  e+         weF+++ F+kg+k
  TRIDC5AG037590.3  26 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYvsGFRKVVPER---------WEFANEFFRKGEK 109
                       9********************6667***********************************999****9999.........************* PP

                       XXXXXXXXXXXX CS
      HSF_DNA-bind  92 ellekikrkkse 103
                       +ll++i+r+k++
  TRIDC5AG037590.3 110 QLLCEIHRRKTS 121
                       *********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE  60
FARDILPNYF KHNNFSSFVR QLNTYVSGFR KVVPERWEFA NEFFRKGEKQ LLCEIHRRKT  120
SGSTTSSSPP PFFAPPHFPL FHPGVSVAHH HQQFGAPRLL ALGGPAAPSP GADGNGRASS  180
AAVLMDENER LRRSNTALLQ ELSHMRKLYN DIIYFVQNHV RPVAPSPAAA TFLQGLGNGM  240
QPRKMPPAST GAGNGLNTSG GSTTSSSSLT IADELSPPPN HLSAEKSGGE AGSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.14e-57HSF family protein