PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG037590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 390aa MW: 41512.5 Da PI: 8.1625

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG037590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.3	2.1e-32	26	121	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+Y gF+kv e+ weF+++ F+kg+k TRIDC5AG037590.1 26 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYvsGFRKVVPER---------WEFANEFFRKGEK 109 9******************6667*******************************9999999.........********* PP XXXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkkse 103 +ll++i+r+k++ TRIDC5AG037590.1 110 QLLCEIHRRKTS 121 *******975 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE 60 FARDILPNYF KHNNFSSFVR QLNTYVSGFR KVVPERWEFA NEFFRKGEKQ LLCEIHRRKT 120 SGSTTSSSPP PFFAPPHFPL FHPGVSVAHH HQQFVGEDGA MAAHAGMGVP FMQPHWRDQG 180 APRLLALGGP AAPSPGADGN GRASSAAVLM DENERLRRSN TALLQELSHM RKLYNDIIYF 240 VQNHVRPVAP SPAAATFLQG LGNGMQPRKM PPASTGAGNG LNTSGGSTTS SSSLTIADEL 300 SPPPNHLSAE KSGGEAGSSS AALSAPTKLF GVHLSAAPVG AGSKRPPSPE EELPSTPPAT 360 KARLALESDD LSLSVAPPSQ PCAASSPARS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MERCGSWSES DAAAQAAAQK AVPAPFLTKT YQLVDDPATD HIVSWGDDRV STFVVWRPPE  60
FARDILPNYF KHNNFSSFVR QLNTYVSGFR KVVPERWEFA NEFFRKGEKQ LLCEIHRRKT  120
SGSTTSSSPP PFFAPPHFPL FHPGVSVAHH HQQFVGEDGA MAAHAGMGVP FMQPHWRDQG  180
APRLLALGGP AAPSPGADGN GRASSAAVLM DENERLRRSN TALLQELSHM RKLYNDIIYF  240
VQNHVRPVAP SPAAATFLQG LGNGMQPRKM PPASTGAGNG LNTSGGSTTS SSSLTIADEL  300
SPPPNHLSAE KSGGEAGSSS AALSAPTKLF GVHLSAAPVG AGSKRPPSPE EELPSTPPAT  360
KARLALESDD LSLSVAPPSQ PCAASSPARS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-76	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG037590.1