PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG037140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 450aa MW: 48017 Da PI: 9.8089

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG037140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	96.8	2.2e-30	198	295	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 +++rlws +De+++L+Gl +++ak g+ +++di ++++ ++ ++s++vs++ql++K+rrLK+K++ ++ak+g+e++++++hd++i+e++ TRIDC5AG037140.1 198 RPSRLWSHDDELLILRGLATYRAKSGVlpGSTNDIGKLHSHIRAQLSVRVSTTQLSDKVRRLKQKYQLLATRAKNGREQELHTPHDRSIYEHA 290 679**********************877888******************************************************** PP DUF573 93 kkiWg 97 kk+Wg TRIDC5AG037140.1 291 KKVWG 295 **8 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MAPKRSAATA WGSPSDASDA EGDAGHRRRG RDDPPSDTDP SKTPPPNPNP KSSAAAPSST 60 PSVAADSAAA GSDSGGTYDS DAEAHRRPAP KPAAPSSPKP GGKPRARSPG INSDSEDSAA 120 PVASDADLDP AAGADSEDNN VSPLRSARRP RAEASIIKPI SSRPMDSPPR GGASASEPRV 180 KRPRSAAISA PSPDPLKRPS RLWSHDDELL ILRGLATYRA KSGVLPGSTN DIGKLHSHIR 240 AQLSVRVSTT QLSDKVRRLK QKYQLLATRA KNGREQELHT PHDRSIYEHA KKVWGLVGSG 300 GGDGGGSGYE NYGGGDSDEL QYSGDSDDDM ESQRDDRYHI KNRKVRPITA ANGNGIGLGA 360 VNANGRGKSG LEKGKDAYPY LWETVEELSK EHPSGAAFKK AFEVLEGSKA RAIEEKLRRF 420 RLTEIRQQLR RMDLMKETVR MVLDALESAD

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MAPKRSAATA WGSPSDASDA EGDAGHRRRG RDDPPSDTDP SKTPPPNPNP KSSAAAPSST  60
PSVAADSAAA GSDSGGTYDS DAEAHRRPAP KPAAPSSPKP GGKPRARSPG INSDSEDSAA  120
PVASDADLDP AAGADSEDNN VSPLRSARRP RAEASIIKPI SSRPMDSPPR GGASASEPRV  180
KRPRSAAISA PSPDPLKRPS RLWSHDDELL ILRGLATYRA KSGVLPGSTN DIGKLHSHIR  240
AQLSVRVSTT QLSDKVRRLK QKYQLLATRA KNGREQELHT PHDRSIYEHA KKVWGLVGSG  300
GGDGGGSGYE NYGGGDSDEL QYSGDSDDDM ESQRDDRYHI KNRKVRPITA ANGNGIGLGA  360
VNANGRGKSG LEKGKDAYPY LWETVEELSK EHPSGAAFKK AFEVLEGSKA RAIEEKLRRF  420
RLTEIRQQLR RMDLMKETVR MVLDALESAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	3e-17	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG037140.1