PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG036260.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ZF-HD
Protein Properties Length: 337aa    MW: 35396.7 Da    PI: 7.4612
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG036260.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer93.91.3e-29963457
       ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57
                       +YkeClkNhAa++G+havDGCgE+mp  + + +++a+ kCaACgCHRnFHR  +
  TRIDC5AG036260.3  9 PTYKECLKNHAAAIGAHAVDGCGEWMPVVELNtADPASYKCAACGCHRNFHRLVM 63
                      58*************************98888799*****************766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
PPPPVEAVPT YKECLKNHAA AIGAHAVDGC GEWMPVVELN TADPASYKCA ACGCHRNFHR  60
LVMVEGSPPP PPPPALLPAP PVPMPMPATV LHGLPQRAHG HETPEDRLPG VDGDDSDSDS  120
DGSEYDDERS VSPPQHPPPA HLPALVAQQP PPYISSAPHP HMLLSLNSSA PGAPQGQSRL  180
PAQLSPATAP PPHGMMPARK RFRTKFTAEQ KQRMQELSER LGWRLQKRDE GVVDEWCRDI  240
GVSKGVFKVW MHNNKHNYLG GHSARRSASA AASSAATTPT APAADPSASH SSPAPTGTGF  300
NMNGTASSAS TATTTATPTP IFAAGRKLNG ASSPQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.14e-26ZF-HD family protein