PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG035520.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 267aa    MW: 29788.3 Da    PI: 9.058
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG035520.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.91.1e-123083755
               AP2  7 rwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      r+++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a++k++g
  TRIDC5AG035520.4 30 RRHRWTGRFEAHLWDkNSWNEsqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 83
                      79*************888866656446*************************98 PP
2AP252.99.2e-17126177155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  TRIDC5AG035520.4 126 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 177
                       89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
RSLAPPSLTS LPKRTTAAGS RANRTERPDR RHRWTGRFEA HLWDKNSWNE SQNKKGKQVY  60
LGAYDEEEAA ARAYDLAALK YWGPDTILNF PLSIYEDELK EMEGQSREEY IGSLRRKSSG  120
FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAAMAYDM AAIEYRGLNA  180
VTNFDLSRYI KWLRPGAADV AAGAGRTPHP MLASLAAQEL PAIDLEAMAF QHDLHQQGME  240
EGMAAEAAAA AAHHVRAEPA AAVAQVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-86AP2 family protein