PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG035520.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 273aa    MW: 30170.9 Da    PI: 10.3479
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG035520.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.38e-133894155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                      s ++GV++++++gr++A+++d  s+n  ++k+   g ++ +e Aa+a++ a++k++g
  TRIDC5AG035520.3 38 SVHRGVTRHRWTGRFEAHLWDkNSWNEsQNKKGKQGAYDEEEAAARAYDLAALKYWG 94
                      689******************88888887755555********************98 PP
2AP256.28.5e-18137188155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++gt eeAa a++ a+ +++g
  TRIDC5AG035520.3 137 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGTQEEAAMAYDMAAIEYRG 188
                       89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
AANSNASAVA DAGAEVRAKP KKRTRKSVPR ESPSQRSSVH RGVTRHRWTG RFEAHLWDKN  60
SWNESQNKKG KQGAYDEEEA AARAYDLAAL KYWGPDTILN FPLSIYEDEL KEMEGQSREE  120
YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYG TQEEAAMAYD  180
MAAIEYRGLN AVTNFDLSRY IKWLRPGAAD VAAGAGRTPH PMLASLAAAA AAAGTAQFPV  240
LPARASTLGH TPTTSALSLL LQSPKFKEMI ERT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-94AP2 family protein