PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG035520.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 396aa MW: 43094 Da PI: 7.1378

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG035520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.6	2.3e-16	53	112	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s ++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g TRIDC5AG035520.2 53 SVHRGVTRHRWTGRFEAHLWDkNSWNEsqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 112 689****************888866656446***********************98 PP
2	AP2	52.1	1.7e-16	155	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g TRIDC5AG035520.2 155 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 206 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MAKPRKNSAA AAAAAAANSN ASAVADAGAE VRAKPKKRTR KSVPRESPSQ RSSVHRGVTR 60 HRWTGRFEAH LWDKNSWNES QNKKGKQVYL GAYDEEEAAA RAYDLAALKY WGPDTILNFP 120 LSIYEDELKE MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK 180 YLYLGTYATQ EEAAMAYDMA AIEYRGLNAV TNFDLSRYIK WLRPGAADVA AGAGRTPHPM 240 LASLAAQELP AIDLEAMAFQ HDLHQQGMEE GMAAEAAAAA AGTAQFPVLP ARASTLGHTP 300 TTSALSLLLQ SPKFKEMIER TSAAESSTTT SSSSMSTPPP PQATRDDGAS PQCSFPEDIQ 360 TFFGSDDGVA YTDVDGLFFG DLSAYASPAF HFELDL

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MAKPRKNSAA AAAAAAANSN ASAVADAGAE VRAKPKKRTR KSVPRESPSQ RSSVHRGVTR  60
HRWTGRFEAH LWDKNSWNES QNKKGKQVYL GAYDEEEAAA RAYDLAALKY WGPDTILNFP  120
LSIYEDELKE MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK  180
YLYLGTYATQ EEAAMAYDMA AIEYRGLNAV TNFDLSRYIK WLRPGAADVA AGAGRTPHPM  240
LASLAAQELP AIDLEAMAFQ HDLHQQGMEE GMAAEAAAAA AGTAQFPVLP ARASTLGHTP  300
TTSALSLLLQ SPKFKEMIER TSAAESSTTT SSSSMSTPPP PQATRDDGAS PQCSFPEDIQ  360
TFFGSDDGVA YTDVDGLFFG DLSAYASPAF HFELDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-98	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG035520.2