PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG035050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 219aa MW: 24322.8 Da PI: 10.7917 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.3 | 9.7e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd l +v+++G+ +W + +r++g++R++k+c++rw++yl TRIDC5AG035050.1 14 KGPWAAEEDAVLRAYVAEHGTAgNWIALPRKIGLNRCGKSCRLRWLNYL 62 79******************99*************************97 PP | |||||||
2 | Myb_DNA-binding | 41 | 4.5e-13 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T eEd l+ + + G++ W+tIa+ ++ gRt++++k++w++ TRIDC5AG035050.1 70 GFTGEEDRLICSLYASIGSR-WSTIAAQLP-GRTDNDVKNYWNT 111 5899****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MGRAPCCDKA SVKKGPWAAE EDAVLRAYVA EHGTAGNWIA LPRKIGLNRC GKSCRLRWLN 60 YLRPNIRHGG FTGEEDRLIC SLYASIGSRW STIAAQLPGR TDNDVKNYWN TKLKRRLLGG 120 GRRPIRYALP LPQQPRLLLM SPTGGGAAST ALERMQLSVQ RRHVGLQDTP GLPFYSNLWP 180 AQQSVLSPAA GYSGFWSHIQ TSTYPGRVNV QDHQRAWGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-72 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG035050.1 |