PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG032230.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 300aa    MW: 32713.3 Da    PI: 4.5659
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG032230.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.5e-1979133356
                       --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++++t+eq+++Le+ Fe+ +r++  e++ eLA++lg+  rqV vWFqNrRa++k
  TRIDC5AG032230.2  79 RKRRLTAEQVRALERSFEEeKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWK 133
                       45589*************98**********************************9 PP
2HD-ZIP_I/II122.81.6e-3978171193
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       e+krrl++eqv++LE+sFeee+ kLeperK+elar+Lg+ prqvavWFqnrRAR+k+kqlE+d++aL++a+d+l + +++L +++++Lr++++
  TRIDC5AG032230.2  78 ERKRRLTAEQVRALERSFEEEKrKLEPERKSELARRLGIAPRQVAVWFQNRRARWKAKQLEQDFDALRAAHDELLAGRDALLADNHRLRSQVT 170
                       69*****************9999*******************************************************************997 PP

       HD-ZIP_I/II  93 e 93 
                       +
  TRIDC5AG032230.2 171 S 171
                       5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESGRLIFGS AAPCRAAGGG GGQMMLFGGS GSFLGGSPVV AGVEDGRRKR PFLTTVDEEL  60
QMDEEMYGYY GLDEHAPERK RRLTAEQVRA LERSFEEEKR KLEPERKSEL ARRLGIAPRQ  120
VAVWFQNRRA RWKAKQLEQD FDALRAAHDE LLAGRDALLA DNHRLRSQVT SLTEKLQAKE  180
SSELEERTAV SGTADAGVPA VELKEGYAAC DGAAGLLLAG FAGGANDSPE SNSYLADARS  240
PPSSSDDDCA GAVSGELNSC ALFLPEYAML DVAAAERGSV QQGEEEEEEA QRKYWAWFWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17883ERKRRL
2128136RRARWKAKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-36HD-ZIP family protein