PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG032110.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 694aa MW: 78980.1 Da PI: 7.6729

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG032110.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.3	1.7e-25	87	175	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s+ksk +++i++ +fvCskeg+++e++ +k+r++ a+ r gC+a+l+v ++ d+kw+ tkl++eHnHe+ TRIDC5AG032110.9 87 FYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVeGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEV 175 9************************************999876635677778899****************************96 PP
2	FAR1	64.1	4e-20	209	295	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA ++GF+vr+++s+ks ++++ ++ ++vCs++ +++ ++++ ++r +r gC+a +++ ++++g+w+v+kl leH+Hel+p TRIDC5AG032110.9 209 FYYSYAIRAGFEVRVRQSRKS-QDESLKMLKLVCSRHRYHSGRENN--GDDTKRDPSRDGCNALFEIIRKDKGVWRVSKLILEHSHELNP 295 9*****************9.6777***********99988..88899999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MEPQGVELED DSIDFWASLG VSTHVHGVDQ MALHSVHILD HQGQSLPPAV VSHPESVCKE 60 LFPVEADPCL EPRVGMEFES GEAAKTFYIA YAGRVGFSVR IARSRKSKCS ESIIMLRFVC 120 SKEGFSKEKR VVEGKKTRKR LASIREGCNA MLEVLRRGDN KWVATKLVKE HNHEVGMPST 180 VHYIATESDT MVDPYIDMEF ESLESAKTFY YSYAIRAGFE VRVRQSRKSQ DESLKMLKLV 240 CSRHRYHSGR ENNGDDTKRD PSRDGCNALF EIIRKDKGVW RVSKLILEHS HELNPAPASS 300 VCCVRSQGEK WLEAMHVRPP VSFVTELNQE MAAAAAKVLP DTCHIFCEKH ILGTVKEELH 360 SIYPGLDHFI TDLRKCIDGC RIEESFESCW ESVLIKHGFR NNEHLQSLYD IRERWAPAYT 420 KQSFHARNLL AQSCQNLEKI IDTYFSSKTQ LVVAVQQLEQ AICNFHAKEA QVDYLTMFQP 480 PALRTASPVE KQAGLVFSRK VFDIFQEQFA ESFGYHAERL EDRMLHKYRL TVDDGDEEAH 540 IVSFSPDQST VCCSCCLFES CGILCRHALR VFIIEGVRFL PKAYVLKRWT KHAKSTVTLD 600 NYIELRGYCE DPSTSRYNDL CYDANKCAKE GSTSTERYKI AKEALCKALD EIMPTRNIRE 660 QNSQNCTTSL RSPVKKLGTS KGTSGKSIKR PAFK

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MEPQGVELED DSIDFWASLG VSTHVHGVDQ MALHSVHILD HQGQSLPPAV VSHPESVCKE  60
LFPVEADPCL EPRVGMEFES GEAAKTFYIA YAGRVGFSVR IARSRKSKCS ESIIMLRFVC  120
SKEGFSKEKR VVEGKKTRKR LASIREGCNA MLEVLRRGDN KWVATKLVKE HNHEVGMPST  180
VHYIATESDT MVDPYIDMEF ESLESAKTFY YSYAIRAGFE VRVRQSRKSQ DESLKMLKLV  240
CSRHRYHSGR ENNGDDTKRD PSRDGCNALF EIIRKDKGVW RVSKLILEHS HELNPAPASS  300
VCCVRSQGEK WLEAMHVRPP VSFVTELNQE MAAAAAKVLP DTCHIFCEKH ILGTVKEELH  360
SIYPGLDHFI TDLRKCIDGC RIEESFESCW ESVLIKHGFR NNEHLQSLYD IRERWAPAYT  420
KQSFHARNLL AQSCQNLEKI IDTYFSSKTQ LVVAVQQLEQ AICNFHAKEA QVDYLTMFQP  480
PALRTASPVE KQAGLVFSRK VFDIFQEQFA ESFGYHAERL EDRMLHKYRL TVDDGDEEAH  540
IVSFSPDQST VCCSCCLFES CGILCRHALR VFIIEGVRFL PKAYVLKRWT KHAKSTVTLD  600
NYIELRGYCE DPSTSRYNDL CYDANKCAKE GSTSTERYKI AKEALCKALD EIMPTRNIRE  660
QNSQNCTTSL RSPVKKLGTS KGTSGKSIKR PAFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-80	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG032110.9