PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031500.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 262aa    MW: 28381.6 Da    PI: 7.2534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031500.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.4e-2186135255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  TRIDC5AG031500.4  86 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 135
                       59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
DLSGEDLVRA LEPFIREASA PPPLHSHLSP TSPFSFPHLS PAQMHYIQAR LHLQRQTGQP  60
GHLGPRPQPM KPASVAAATP PRPQKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE  120
EAALAYDQAA YRLRGDAARL NFPDNAASRG PLHASVDAKL QTLCQNITAS KNAKKSASVS  180
ASTAAATSST PTSNCSSPSS DEASSSLESV ESSPSPATTT AAEVPEMQQL DFSEAPWDEA  240
ACFALTKYPS YEIDWDSLLA AN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-40ERF family protein