PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG031500.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25810 Da PI: 9.2912 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.3e-21 | 88 | 137 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g TRIDC5AG031500.3 88 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 137 59******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
REASAPPPLH SHLSPTSPFS FPHAAYSGYP YGVQAQAQTE LSPAQMHYIQ ARLHLQRQTG 60 QPGHLGPRPQ PMKPASVAAA TPPRPQKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT 120 AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA KLQTLCQNIT ASKNAKKSAS 180 VSSVESSPSP ATTTAAEVPE MQQLDFSEAP WDEAACFALT KYPSYEIDWD SLLAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39780.1 | 6e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG031500.3 |