PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031500.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 219aa    MW: 23750.4 Da    PI: 8.4713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031500.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.7e-214392255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  TRIDC5AG031500.2 43 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 92
                      59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MHYIQARLHL QRQTGQPGHL GPRPQPMKPA SVAAATPPRP QKLYRGVRQR HWGKWVAEIR  60
LPRNRTRLWL GTFDTAEEAA LAYDQAAYRL RGDAARLNFP DNAASRGPLH ASVDAKLQTL  120
CQNITASKNA KKSASVSAST AAATSSTPTS NCSSPSSDEA SSSLESVESS PSPATTTAAE  180
VPEMQQLDFS EAPWDEAACF ALTKYPSYEI DWDSLLAAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.15e-41ERF family protein