PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG031500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 284aa MW: 30625.1 Da PI: 6.954 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66 | 7.2e-21 | 108 | 157 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g TRIDC5AG031500.1 108 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 157 59******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 284 aa Download sequence |
MAAAIDLSGE DLVRALEPFI REASAPPPLH SHLSPTSPFS FPHAAYSGYP YGVQAQAQTE 60 LSPAQMHYIQ ARLHLQRQTG QPGHLGPRPQ PMKPASVAAA TPPRPQKLYR GVRQRHWGKW 120 VAEIRLPRNR TRLWLGTFDT AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA 180 KLQTLCQNIT ASKNAKKSAS VSASTAAATS STPTSNCSSP SSDEASSSLE SVESSPSPAT 240 TTAAEVPEMQ QLDFSEAPWD EAACFALTKY PSYEIDWDSL LAAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39780.1 | 6e-43 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG031500.1 |