PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 446aa    MW: 49874.3 Da    PI: 7.1838
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.66.6e-06189209626
                       -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                       C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.9 189 CFDFLNKGKCERGPECRFAHS 209
                       6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MRCTNEWPAG VVDGADTSKV PPQVLDPQGY DPVVAELVAE IKPRYHIAGT KGVFYAREPY  60
VNDSSPHVTR FIGLANVGNK EKQKFIHAIS PTPASTMSSA DIHARPPNAT LSPYAAPAKS  120
VHAEDTPKRP AESTDLQYWR YDVKRQRQGQ TDGSLLCFKY TSSGSCPRGS KCNFRHDEEA  180
REHCQRNVCF DFLNKGKCER GPECRFAHSL TEEAAARDAK PRSERRRVES SCWFCLSSPD  240
VESHLVISIG DGYYCALAKG PLVPDHVLVI PVEHFPTTIA MPVEPEAELR RYKDSLGKYF  300
EKRGKAAVYF EWVSQQSRHA NLQAVPVPLS KAANVKKIFH LAAQRLGFEF SVVNPDGDAN  360
QGRELLRSQY DGKSGLFYVE LPDGTLLLHI IDSGEKFPAQ FGREVLAGLL SMADRADWRN  420
CKLSKEEEVK MVDDFKQGFH EFDPAE