PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 553aa    MW: 60919.7 Da    PI: 6.5094
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.38.6e-06296316626
                       -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                       C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.6 296 CFDFLNKGKCERGPECRFAHS 316
                       6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    
GDSPPGDVAD YLEGRAAVPI PTYFTGDYGP TAPRLLSKAA ADARGFNPGG IEICPNLFWL  60
KGSALFNLHG LSVAYLSGRK GLGGPGCYSQ DDVDALRALA EEPGIVDLFL TNEWPAGVVD  120
GADTSKVPPQ VLDPQGYDPV VAELVAEIKP RYHIAGTKGV FYAREPYVND SSPHVTRFIG  180
LANVGNKEKQ KFIHAISPTP ASTMSSADIH ARPPNATLSP YAAPAKSVHA EDTPKRPAES  240
TDLQYWRYDV KRQRQGQTDG SLLCFKYTSS GSCPRGSKCN FRHDEEAREH CQRNVCFDFL  300
NKGKCERGPE CRFAHSLTEE AAARDAKPRS ERRRVESSCW FCLSSPDVES HLVISIGDGY  360
YCALAKGPLV PDHVLVIPVE HFPTTIAMPV EPEAELRRYK DSLGKYFEKR GKAAVYFEWV  420
SQQSRHANLQ AVPVPLSKAA NVKKIFHLAA QRLGFEFSVV NPDGDANQGR ELLRSQYDGK  480
SGLFYVELPD GTLLLHIIDS GEKFPAQFGR EVLAGLLSMA DRADWRNCKL SKEEEVKMVD  540
DFKQGFHEFD PAE