PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 583aa    MW: 64207.4 Da    PI: 6.6505
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.29.1e-06326346626
                       -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                       C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.5 326 CFDFLNKGKCERGPECRFAHS 346
                       6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    
FKRVKSVNQS TGPFHALLCV GQFFPPEAAE GDSPPGDVAD YLEGRAAVPI PTYFTGDYGP  60
TAPRLLSKAA ADARGFNPGG IEICPNLFWL KGSALFNLHG LSVAYLSGRK GLGGPGCYSQ  120
DDVDALRALA EEPGIVDLFL TNEWPAGVVD GADTSKVPPQ VLDPQGYDPV VAELVAEIKP  180
RYHIAGTKGV FYAREPYVND SSPHVTRFIG LANVGNKEKQ KFIHAISPTP ASTMSSADIH  240
ARPPNATLSP YAAPAKSVHA EDTPKRPAES TDLQYWRYDV KRQRQGQTDG SLLCFKYTSS  300
GSCPRGSKCN FRHDEEAREH CQRNVCFDFL NKGKCERGPE CRFAHSLTEE AAARDAKPRS  360
ERRRVESSCW FCLSSPDVES HLVISIGDGY YCALAKGPLV PDHVLVIPVE HFPTTIAMPV  420
EPEAELRRYK DSLGKYFEKR GKAAVYFEWV SQQSRHANLQ AVPVPLSKAA NVKKIFHLAA  480
QRLGFEFSVV NPDGDANQGR ELLRSQYDGK SGLFYVELPD GTLLLHIIDS GEKFPAQFGR  540
EVLAGLLSMA DRADWRNCKL SKEEEVKMVD DFKQGFHEFD PAE