PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 472aa    MW: 51922.6 Da    PI: 7.5273
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.57.1e-06333353626
                       -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                       C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.2 333 CFDFLNKGKCERGPECRFAHS 353
                       6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
HGRLHQLFKR VKSVNQSTGP FHALLCVGQF FPPEAAEGDS PPGDVADYLE GRAAVPIPTY  60
FTGDYGPTAP RLLSKAAADA RGFNPGGIEI CPNLFWLKGS ALFNLHGLSV AYLSGRKGLG  120
GPGCYSQDDV DALRALAEEP GIVDLFLTNE WPAGVVDGAD TSKVPPQVLD PQGYDPVVAE  180
LVAEIKPRYH IAGTKGVFYA REPYVNDSSP HVTRFIGLAN VGNKEKQKFI HAISPTPAST  240
MSSADIHARP PNATLSPYAA PAKSVHAEDT PKRPAESTDL QYWRYDVKRQ RQGQTDGSLL  300
CFKYTSSGSC PRGSKCNFRH DEEAREHCQR NVCFDFLNKG KCERGPECRF AHSLTEEAAA  360
RDAKPRSERR RVESSCWFCL SSPDVESHLV ISIGDGYYCA LAKGPLVPDH VLVIPVEHFP  420
TTIAMPVEPE AELRRYKDSL GKYFEKRGKA AVYFEWVSQQ SRHANLQVRI PL