PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG031190.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 413aa    MW: 46439.6 Da    PI: 8.0332
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG031190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.86.1e-06156176626
                       -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                       C +f+  G C +G+ C+FaH+
  TRIDC5AG031190.1 156 CFDFLNKGKCERGPECRFAHS 176
                       6678888*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MALILLRCLL RYHIAGTKGV FYAREPYVND SSPHVTRFIG LANVGNKEKQ KFIHAISPTP  60
ASTMSSADIH ARPPNATLSP YAAPAKSVHA EDTPKRPAES TDLQYWRYDV KRQRQGQTDG  120
SLLCFKYTSS GSCPRGSKCN FRHDEEAREH CQRNVCFDFL NKGKCERGPE CRFAHSLTEE  180
AAARDAKPRS ERRRVESSCW FCLSSPDVES HLVISIGDGY YCALAKGPLV PDHVLVIPVE  240
HFPTTIAMPV EPEAELRRYK DSLGKYFEKR GKAAVYFEWV SQQSRHANLQ AVPVPLSKAA  300
NVKKIFHLAA QRLGFEFSVV NPDGDANQGR ELLRSQYDGK SGLFYVELPD GTLLLHIIDS  360
GEKFPAQFGR EVLAGLLSMA DRADWRNCKL SKEEEVKMVD DFKQGFHEFD PAE