PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG030110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 257aa MW: 27825.4 Da PI: 10.8412 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 26.2 | 1.6e-08 | 184 | 205 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 +dDg +WrKYGqKe+ g+++pr TRIDC5AG030110.1 184 VDDGRSWRKYGQKEILGAQHPR 205 58*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
LPPLNTPPPF SPITSSFRLS SALSTRTHAH THTHPSDLAF ALRNRRGILH RRERSSEQRE 60 MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMIRS 120 GHFNGPKRSA AGAGLDSPPL SATPSPLSGV SNTPFKPNKK RKTSEKGGRQ IRVSSAGEGA 180 DAPVDDGRSW RKYGQKEILG AQHPRLVSPH FGQSSSLISN SNPHLFSEVA TQSWRSLLWI 240 WNTVPEFMAS TCQIGIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 9e-13 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG030110.1 |