PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG030100.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 249aa MW: 27259.2 Da PI: 5.5244 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 87 | 1.7e-27 | 27 | 87 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+r++edp +++++Y+geH++ TRIDC5AG030100.7 27 VDDGHSWRKYGQKDILGAKHPRGYYRCTHRksqGCAATKQVQRADEDPALFDVIYHGEHTC 87 59***************************98899*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
WICRKTMEKR KHQVRVSSEG AGAETPVDDG HSWRKYGQKD ILGAKHPRGY YRCTHRKSQG 60 CAATKQVQRA DEDPALFDVI YHGEHTCVHK TVAAAAAMVQ PAEENPDARR HLQNLSTSLT 120 VNTEGLTATT GHQGCGTTTS FCFSSQAVSA LTTPQEHYPF SMPSTPENCF GQGASLSTSL 180 EPSPVTSDSN RFSMNPFQAE WRAQSEYDEV VSALVAAGTM PALAMEMEEN AFSMDGFEFD 240 VSCFFASDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 1e-34 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG030100.7 |