PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG023830.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 326aa    MW: 36715.4 Da    PI: 4.7908
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG023830.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.47.2e-131874555
               AP2  5 GVrwdkkrgrWvAeIrd.pse...ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                       V +++++gr++A+++d  +    ++ k+ ++++lg ++t+e Aa+a++ a++k++g
  TRIDC5AG023830.5 18 YVPRHRWTGRFEAHLWDkNCFtsiQNkKKgRQVYLGAYDTEEAAARAYDLAALKYWG 74
                      6778*************5444666335446*************************98 PP
2AP256.38e-18117169156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5AG023830.5 117 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 169
                       89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
PNLGLHLLGS RRLHPCQYVP RHRWTGRFEA HLWDKNCFTS IQNKKKGRQV YLGAYDTEEA  60
AARAYDLAAL KYWGPETTLN FTVDEYAKER SEMEGVSREE YLAALRRRSS GFSRGVSKYR  120
GVARHHHNGR WEARIGRVLG NKYLYLGTFD TQEEAARAYD LAAIEYRGAN AVTNFDISRY  180
LDQPQLLTQL EQGPQVVPAL QEELQHDHQS DNAVQELNSG EAQKPGSVNE PIAVDDTDNT  240
GDMGAPLVFD SGVEENLWSP CYELENFFGP NNSNSMNLSE YFNVNDATFE SNIGYLFEGC  300
PDIDDCSTRH GTGLAALGFL KEGDDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-69AP2 family protein