PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG023830.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 200aa MW: 22394.4 Da PI: 4.3561 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.5e-18 | 25 | 77 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + +k+ +lg+f+t eeAa+a++ a+ +++g+ TRIDC5AG023830.4 25 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 77 89****99**********988422...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEGVSREEYL AALRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTFDTQ 60 EEAARAYDLA AIEYRGANAV TNFDISRYLD QPQLLTQLEQ GPQVVPALQE ELQHDHQSDN 120 AVQELNSGEA QKPGSVNEPI AVDDTDNTGD MGAPLVFDSG VEENLWSPCY ELENFFGPNN 180 SNSMNLSEYF NVNDATFESN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 5e-36 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG023830.4 |