PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG023830.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 286aa    MW: 32492.7 Da    PI: 5.1046
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG023830.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.91.4e-091568555
               AP2  5 GVrwdkkrgrWvAeIrdpseng....kr.krfslgkfgtaeeAakaaiaarkkleg 55
                       V +++++gr++A+++d   n+    ++ k+ + g ++t+e Aa+a++ a++k++g
  TRIDC5AG023830.3 15 YVPRHRWTGRFEAHLWDK--NCftsiQNkKKGRQGAYDTEEAAARAYDLAALKYWG 68
                      6778**********9993..45656744677778********************98 PP
2AP256.66.5e-18111163156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       s+y+GV +++ +grW+A+I  +     +k+ +lg+f+t eeAa+a++ a+ +++g+
  TRIDC5AG023830.3 111 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 163
                       89****99**********988422...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
PNLGLRSRRL HPCQYVPRHR WTGRFEAHLW DKNCFTSIQN KKKGRQGAYD TEEAAARAYD  60
LAALKYWGPE TTLNFTVDEY AKERSEMEGV SREEYLAALR RRSSGFSRGV SKYRGVARHH  120
HNGRWEARIG RVLGNKYLYL GTFDTQEEAA RAYDLAAIEY RGANAVTNFD ISRYLDQPQL  180
LTQLEQGPQV VPALQEELQH DHQSDNAVQE LNSGEAQKPG SVNEPIAVDD TDNTGDMGAP  240
LVFDSGVEEN LWSPCYELEN FFGPNNSNSM NLSEYFNVND ATFESN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.37e-66AP2 family protein