PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG023830.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 263aa MW: 29122.9 Da PI: 4.1966 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.7e-18 | 25 | 77 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + +k+ +lg+f+t eeAa+a++ a+ +++g+ TRIDC5AG023830.2 25 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFDTQEEAARAYDLAAIEYRGA 77 89****99**********988422...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MEGVSREEYL AALRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTFDTQ 60 EEAARAYDLA AIEYRGANAV TNFDISRYLD QPQLLTQLEQ GPQVVPALQE ELQHDHQSDN 120 AVQELNSGEA QKPGSVNEPI AVDDTDNTGD MGAPLVFDSG VEENLWSPCY ELENFFGPNN 180 SNSMNLSEYF NVNDATFESN IGYLFEGCPD IDDCSTRHGT GLAALGFLKE GDDNMKDVPD 240 MDAELTPQAN DVSCPPKMIT VCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 2e-35 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG023830.2 |