PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG021390.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 425aa MW: 46885.6 Da PI: 4.3981

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG021390.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.1	2.3e-26	112	177	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg TRIDC5AG021390.6 112 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 177 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
RYQPFGSPPG EYHHFGPADG GGTAEMTEAV VLRTPLKRKH NREDNEVAES NDWMMSPGYA 60 NAANSPIPTP PSGKGSKMSA KPKAAKGQKS CPQTPLFSGS PGNPATPVGG CRYDSSLGLL 120 TKKFLNLLKG APGGMVDLNN AAETLEVQKR RIYDITNVLE GIGLIEKKLK NNIRWKGIDD 180 SRPGEVSDDM SILQGDIEAL TLQEHSLDGQ ISEMRDKLRE LTEDENNQKW LYVTEDDIKS 240 LPCFQNQTLI AIKAPHGTTL EVPDPDEVND YPQRRYRIVL RSTMGPIDVY LVSQFEEMSG 300 METPPRPAQT ISMDYLENPR TPLATGSNKD VEMENVQQGL IMPPDAPTTQ DIGGMMKIVP 360 SELDTDADYW LLSDTGVSIT DMWKTAPDVE WEGIDINAED FLEVGTPRQQ DQPPSEMVDH 420 PSCIS

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

RYQPFGSPPG EYHHFGPADG GGTAEMTEAV VLRTPLKRKH NREDNEVAES NDWMMSPGYA  60
NAANSPIPTP PSGKGSKMSA KPKAAKGQKS CPQTPLFSGS PGNPATPVGG CRYDSSLGLL  120
TKKFLNLLKG APGGMVDLNN AAETLEVQKR RIYDITNVLE GIGLIEKKLK NNIRWKGIDD  180
SRPGEVSDDM SILQGDIEAL TLQEHSLDGQ ISEMRDKLRE LTEDENNQKW LYVTEDDIKS  240
LPCFQNQTLI AIKAPHGTTL EVPDPDEVND YPQRRYRIVL RSTMGPIDVY LVSQFEEMSG  300
METPPRPAQT ISMDYLENPR TPLATGSNKD VEMENVQQGL IMPPDAPTTQ DIGGMMKIVP  360
SELDTDADYW LLSDTGVSIT DMWKTAPDVE WEGIDINAED FLEVGTPRQQ DQPPSEMVDH  420
PSCIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-116	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG021390.6