PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021390.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 349aa    MW: 38482.9 Da    PI: 4.5247
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021390.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.51.7e-2659124171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5AG021390.4  59 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 124
                       6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MMSPGYANAA NSPIPTPPSG KGSKMSAKPK AAKGQKSCPQ TPLFSGSPGN PATPVGGCRY  60
DSSLGLLTKK FLNLLKGAPG GMVDLNNAAE TLEVQKRRIY DITNVLEGIG LIEKKLKNNI  120
RWKGIDDSRP GEVSDDMSIL QGDIEALTLQ EHSLDGQISE MRDKLRELTE DENNQKWLYV  180
TEDDIKSLPC FQNQTLIAIK APHGTTLEVP DPDEVNDYPQ RRYRIVLRST MGPIDVYLVS  240
QFEEMSGMET PPRPAQTISM DYLENPRTPL ATGSNKDVEM ENVQQGLIMP PDAPTTQDIG  300
GMMKIVPSEL DTDADYWLLS DTGVSITDMW KTARILFLTV YITCDVLML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-107E2F/DP family protein