PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG021390.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 392aa MW: 43403.9 Da PI: 4.3566

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG021390.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.3	2e-26	79	144	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg TRIDC5AG021390.3 79 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 144 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MVLKRKHNRE DNEVAESNDW MMSPGYANAA NSPIPTPPSG KGSKMSAKPK AAKGQKSCPQ 60 TPLFSGSPGN PATPVGGCRY DSSLGLLTKK FLNLLKGAPG GMVDLNNAAE TLEVQKRRIY 120 DITNVLEGIG LIEKKLKNNI RWKGIDDSRP GEVSDDMSIL QGDIEALTLQ EHSLDGQISE 180 MRDKLRELTE DENNQKWLYV TEDDIKSLPC FQNQTLIAIK APHGTTLEVP DPDEVNDYPQ 240 RRYRIVLRST MGPIDVYLVS QFEEMSGMET PPRPAQTISM DYLENPRTPL ATGSNKDVEM 300 ENVQQGLIMP PDAPTTQDIG GMMKIVPSEL DTDADYWLLS DTGVSITDMW KTAPDVEWEG 360 IDINAEDFLE VGTPRQQDQP PSEMVDHPSC IS

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MVLKRKHNRE DNEVAESNDW MMSPGYANAA NSPIPTPPSG KGSKMSAKPK AAKGQKSCPQ  60
TPLFSGSPGN PATPVGGCRY DSSLGLLTKK FLNLLKGAPG GMVDLNNAAE TLEVQKRRIY  120
DITNVLEGIG LIEKKLKNNI RWKGIDDSRP GEVSDDMSIL QGDIEALTLQ EHSLDGQISE  180
MRDKLRELTE DENNQKWLYV TEDDIKSLPC FQNQTLIAIK APHGTTLEVP DPDEVNDYPQ  240
RRYRIVLRST MGPIDVYLVS QFEEMSGMET PPRPAQTISM DYLENPRTPL ATGSNKDVEM  300
ENVQQGLIMP PDAPTTQDIG GMMKIVPSEL DTDADYWLLS DTGVSITDMW KTAPDVEWEG  360
IDINAEDFLE VGTPRQQDQP PSEMVDHPSC IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-110	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG021390.3