PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021390.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 264aa    MW: 29363.3 Da    PI: 6.789
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021390.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.21e-2680145171
            E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                        r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5AG021390.11  80 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 145
                        6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
RTPLKRKHNR EDNEVAESND WMMSPGYANA ANSPIPTPPS GKGSKMSAKP KAAKGQKSCP  60
QTPLFSGSPG NPATPVGGCR YDSSLGLLTK KFLNLLKGAP GGMVDLNNAA ETLEVQKRRI  120
YDITNVLEGI GLIEKKLKNN IRWKGIDDSR PGEVSDDMSI LQGDIEALTL QEHSLDGQIS  180
EMRDKLRELT EDENNQKWLY VTEDDIKSLP CFQNQTLIAI KAPHGTTLEV PDPDEVNDYP  240
QRRYRIVLRS TMGPIDVYLV RYMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.18e-98E2F/DP family protein