PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021390.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 374aa    MW: 41442.1 Da    PI: 4.6334
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021390.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.41.9e-2684149171
            E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                        r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5AG021390.10  84 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 149
                        6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
AVVLRTPLKR KHNREDNEVA ESNDWMMSPG YANAANSPIP TPPSGKGSKM SAKPKAAKGQ  60
KSCPQTPLFS GSPGNPATPV GGCRYDSSLG LLTKKFLNLL KGAPGGMVDL NNAAETLEVQ  120
KRRIYDITNV LEGIGLIEKK LKNNIRWKGI DDSRPGEVSD DMSILQGDIE ALTLQEHSLD  180
GQISEMRDKL RELTEDENNQ KWLYVTEDDI KSLPCFQNQT LIAIKAPHGT TLEVPDPDEV  240
NDYPQRRYRI VLRSTMGPID VYLVSQFEEM SGMETPPRPA QTISMDYLEN PRTPLATGSN  300
KDVEMENVQQ GLIMPPDAPT TQDIGGMMKI VPSELDTDAD YWLLSDTGVS ITDMWKTARI  360
LFLTVYITCD VLML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-113E2F/DP family protein