PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG015560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 393aa MW: 42430.3 Da PI: 7.3013 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+lv + + G g+W+ +ar g+ R++k+c++rw +yl TRIDC5AG015560.1 36 KGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v++++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC5AG015560.1 89 RGAFSPQEEDLIVNLHAILGNR-WSQIAARLP-GRTDNEIKNFWNS 132 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence |
SGRAMRKPVE CPATKCSGGA APGNSNVAAA AAKLRKGLWS PEEDERLVAY MLRSGQGSWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG 120 RTDNEIKNFW NSTIKKRLKM NSAASSPATT ECASPREPKL DGGSASCLDL TSLEDGSHHG 180 MKSMWRMDSS SSSSSSSSIQ QSRPSTMAPA ANRGYGGLLL PLPDQFCGVA PSTHTSVPPF 240 FHDHSSFKQV SPLRAGGYYP HGMAMEGGGG SCFTGEEAVG GGGEHSVLFN VPPLLEPMAV 300 ALQDQTLMAS TGNSDNNHRN TNSTAEGTTL SSKNGCNIND DNNSKNNINS VVSYWEQHGH 360 QQHMSRNVVM GEWDLEELMK DVSCLPFLDF QVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 4e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG015560.1 |