PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012780.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 172aa    MW: 19445.9 Da    PI: 8.4212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.7e-16243548
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5AG012780.2  2 TPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 43
                      9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MTPHEERLIL ELHARWGNRW SRIARKLPGR TDNEIKNYWR THMRKKAQER KRSVSPSPSS  60
SSVTYQSIQP QTPSIMGIGE QELHGGSSCI TSILKGTPAD MDGYLMDQIW MEIEAPSGVN  120
FHDGKDNSYS SPSGPLLPSP MWDYYSPEAG WKMDEIKMAP QVSYSKGIGP SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.14e-31MYB_related family protein