PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG011750.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 713aa MW: 81439.5 Da PI: 5.9827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG011750.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.3	5.9e-24	85	174	2	89
FAR1 2 fYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYneYA+++GF r+ +s++sk ++ +++r+fvCs+eg ++++ + + +++r+r++ r gC+a+++v +e +++w+v+kl++ HnH+l TRIDC5AG011750.9 85 FYNEYARHLGFPFRVGRSRRSKGaEEVVVMRRFVCSREGMYRKKNPSsdEATKKRERMSMREGCNAMMEVVRE-SNHWVVSKLDTAHNHNL 174 *******************651566789*****8777665545788999************99.9************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MEAARSEGDE LIADYVDCLM SLDTNAQSVQ NNNLILGDPV IEAGVAASVG GITEQNAMKD 60 FVPPEDPKEP LLGMTFESDE AAKTFYNEYA RHLGFPFRVG RSRRSKGAEE VVVMRRFVCS 120 REGMYRKKNP SSDEATKKRE RMSMREGCNA MMEVVRESNH WVVSKLDTAH NHNLGTCSRV 180 GYLRDRGLLD ASNKITMMGS DGVPFLRQNI LGEGGDAQGL LDYLKKMQSN DPAFFHAIQV 240 DKNSCLMNVF WVDARAKLAY QHFGDAVTFD TTYKKNKYMM PFVTFSGVNH HLQRVIFGCA 300 LLMEDTECSF VWLFETWLAA MSGKAPCSLV TDQNRAMKAA IGRVFPHTCH RFCKWHILSR 360 TKQKLAHTYS EHPTLIDELE SCVIESETIN TFETAWMSII DTYDLRNNTW LQAMYNIRQK 420 WVPLYLMDTF CAEISKAQKL ETMNDFYKKY FSTKVTLEVF LTQFDLSTEN HYEEEAKADM 480 DTSLNLVTTK TASPMEKQAA RTYTKAVFSR FQEEFTESLA YIIQKTKDGC ISEYNVMKDE 540 NSSDTFCVTY NASNKMAKCS CKYFEFSGIL CRHILGVFII VDPHLLPPDY YLKRWTRKAR 600 DCGLLEYNCD NHQDDACQSI TSRYDVLCAD AIRYAEKGSG SETVYKAAKD ILQKAYEEII 660 VYERNPTRVS QRDAININED VMVDDSMTDQ SLPDSRQKVT NLLGQFLVSS WSP

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MEAARSEGDE LIADYVDCLM SLDTNAQSVQ NNNLILGDPV IEAGVAASVG GITEQNAMKD  60
FVPPEDPKEP LLGMTFESDE AAKTFYNEYA RHLGFPFRVG RSRRSKGAEE VVVMRRFVCS  120
REGMYRKKNP SSDEATKKRE RMSMREGCNA MMEVVRESNH WVVSKLDTAH NHNLGTCSRV  180
GYLRDRGLLD ASNKITMMGS DGVPFLRQNI LGEGGDAQGL LDYLKKMQSN DPAFFHAIQV  240
DKNSCLMNVF WVDARAKLAY QHFGDAVTFD TTYKKNKYMM PFVTFSGVNH HLQRVIFGCA  300
LLMEDTECSF VWLFETWLAA MSGKAPCSLV TDQNRAMKAA IGRVFPHTCH RFCKWHILSR  360
TKQKLAHTYS EHPTLIDELE SCVIESETIN TFETAWMSII DTYDLRNNTW LQAMYNIRQK  420
WVPLYLMDTF CAEISKAQKL ETMNDFYKKY FSTKVTLEVF LTQFDLSTEN HYEEEAKADM  480
DTSLNLVTTK TASPMEKQAA RTYTKAVFSR FQEEFTESLA YIIQKTKDGC ISEYNVMKDE  540
NSSDTFCVTY NASNKMAKCS CKYFEFSGIL CRHILGVFII VDPHLLPPDY YLKRWTRKAR  600
DCGLLEYNCD NHQDDACQSI TSRYDVLCAD AIRYAEKGSG SETVYKAAKD ILQKAYEEII  660
VYERNPTRVS QRDAININED VMVDDSMTDQ SLPDSRQKVT NLLGQFLVSS WSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-150	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG011750.9