PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG011750.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 80959.1 Da PI: 6.1832

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG011750.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.9e-24	84	173	2	89
FAR1 2 fYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYneYA+++GF r+ +s++sk ++ +++r+fvCs+eg ++++ + + +++r+r++ r gC+a+++v +e +++w+v+kl++ HnH+l TRIDC5AG011750.11 84 FYNEYARHLGFPFRVGRSRRSKGaEEVVVMRRFVCSREGMYRKKNPSsdEATKKRERMSMREGCNAMMEVVRE-SNHWVVSKLDTAHNHNL 173 *******************651566789*****8777665545788999************99.9************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MSARSEGDEL IADYVDCLMS LDTNAQSVQN NNLILGDPVI EAGVAASVGG ITEQNAMKDF 60 VPPEDPKEPL LGMTFESDEA AKTFYNEYAR HLGFPFRVGR SRRSKGAEEV VVMRRFVCSR 120 EGMYRKKNPS SDEATKKRER MSMREGCNAM MEVVRESNHW VVSKLDTAHN HNLGTCSRVG 180 YLRDRGLLDA SNKITMMGSD GVPFLRQNIL GEGGDAQGLL DYLKKMQSND PAFFHAIQVD 240 KNSCLMNVFW VDARAKLAYQ HFGDAVTFDT TYKKNKYMMP FVTFSGVNHH LQRVIFGCAL 300 LMEDTECSFV WLFETWLAAM SGKAPCSLVT DQNRAMKAAI GRVFPHTCHR FCKWHILSRT 360 KQKLAHTYSE HPTLIDELES CVIESETINT FETAWMSIID TYDLRNNTWL QAMYNIRQKW 420 VPLYLMDTFC AEISKAQKLE TMNDFYKKYF STKVTLEVFL TQFDLSTENH YEEEAKADMD 480 TSLNLVTTKT ASPMEKQAAR TYTKAVFSRF QEEFTESLAY IIQKTKDGCI SEYNVMKDEN 540 SSDTFCVTYN ASNKMAKCSC KYFEFSGILC RHILGVFIIV DPHLLPPDYY LKRWTRKARD 600 CGLLEYNCDN HQDDACQSIT SRYDVLCADA IRYAEKGSGS ETVYKAAKDI LQKAYEEIIV 660 YERNPTRVSQ RDAININEDV MVDDSMTDQS LPDSRQKVCL MLNIIKFS

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MSARSEGDEL IADYVDCLMS LDTNAQSVQN NNLILGDPVI EAGVAASVGG ITEQNAMKDF  60
VPPEDPKEPL LGMTFESDEA AKTFYNEYAR HLGFPFRVGR SRRSKGAEEV VVMRRFVCSR  120
EGMYRKKNPS SDEATKKRER MSMREGCNAM MEVVRESNHW VVSKLDTAHN HNLGTCSRVG  180
YLRDRGLLDA SNKITMMGSD GVPFLRQNIL GEGGDAQGLL DYLKKMQSND PAFFHAIQVD  240
KNSCLMNVFW VDARAKLAYQ HFGDAVTFDT TYKKNKYMMP FVTFSGVNHH LQRVIFGCAL  300
LMEDTECSFV WLFETWLAAM SGKAPCSLVT DQNRAMKAAI GRVFPHTCHR FCKWHILSRT  360
KQKLAHTYSE HPTLIDELES CVIESETINT FETAWMSIID TYDLRNNTWL QAMYNIRQKW  420
VPLYLMDTFC AEISKAQKLE TMNDFYKKYF STKVTLEVFL TQFDLSTENH YEEEAKADMD  480
TSLNLVTTKT ASPMEKQAAR TYTKAVFSRF QEEFTESLAY IIQKTKDGCI SEYNVMKDEN  540
SSDTFCVTYN ASNKMAKCSC KYFEFSGILC RHILGVFIIV DPHLLPPDYY LKRWTRKARD  600
CGLLEYNCDN HQDDACQSIT SRYDVLCADA IRYAEKGSGS ETVYKAAKDI LQKAYEEIIV  660
YERNPTRVSQ RDAININEDV MVDDSMTDQS LPDSRQKVCL MLNIIKFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-151	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG011750.11