PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 524aa    MW: 59931.2 Da    PI: 8.7186
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.96e-16581371499
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + + +p kf++++ g    sk ++le ++g+++++++  ++  ++++lt+GW  F++a +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5AG010270.1  58 REMNIPEKFVNNFRGR--ISKVMKLEAPDGNVYNIQV--TNDLNKITLTSGWAAFASAYELKEHDLLVFSYTGNSHF--KVLIFDP 137
                       4599******888766..7899***************..**********************************9999..9999885 PP
2B337.15.7e-122623421394
                       TT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3  13 sgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                       sg lv+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5AG010270.1 262 SGSLVICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 342
                       467***********423..344677777477799*9999654444.458***********************887544444444 PP
3B349.57.7e-164285151199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        k+++l++p kfa++h ++++++  l l+  ++++W  ++ y   ++++   + W +Fv++n+L+ g ++vF+l++  s+ ++ v+vf k
  TRIDC5AG010270.1 428 IKNNLLTFPEKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPEKQGFN-YSSWTKFVRDNKLRKGHVCVFELMKGvSKVTMIVHVFTK 515
                       6899***********9.4555555566666889*******9988888864.569*********************888********9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
CEKEVFHVLM NCDPNAQEKE SNSESHRRCE LCDVHFYWHH LDDRQKHFLR LMVGDFRREM  60
NIPEKFVNNF RGRISKVMKL EAPDGNVYNI QVTNDLNKIT LTSGWAAFAS AYELKEHDLL  120
VFSYTGNSHF KVLIFDPSGC EKELFRIVMN HTPNVQKRGI SHDEIFLKET RRRDGGSRDN  180
NPRKTKKVTP LDSPSPKSAE GLTSPENTMN SGGPPETSEP RYVLATGCNL TTAQKGQIDA  240
LVKKVRPVIP FYITAMNKTS ISGSLVICKD YAAKYLPHED QFITLCHPRK SNIWLDNLKV  300
TTDGSGMLSA GWSSFALHNE LRESDVCVFE VSKSAGEMTM VVHSLEGGHH LQGKEPESQN  360
KCDYPVKGKA IKEAESDHKH DESKSNYYYS KYAKGLSGEE LEEIFRSALI QRGNVVYVTI  420
LGKNQVRIKN NLLTFPEKFA AKHLVERSHD ILLLRPNRSE TWCARYYYHP EKQGFNYSSW  480
TKFVRDNKLR KGHVCVFELM KGVSKVTMIV HVFTKVDGRF VLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-18B3 family protein