PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010240.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 496aa    MW: 58474.2 Da    PI: 10.3367
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010240.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.72e-08474495526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                        Cr+++++  C+y ++CkF+Hg
  TRIDC5AG010240.4 474 MCRYYQQGLRCPYEGNCKFSHG 495
                       7******88************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    
MRQPWPDEKE RSRVLEEKHA RGFQARKSRE VRIHEKEIDK MRRFNRLKDN KSKGKENMNQ  60
ISSQTVVPQQ KVVSTDTVDQ RFDKGRTDSL PQGEPGNARQ QQISSKQNPA IHLFHQQFLY  120
QGPSVQHGKP EKTRQQQILS RPTTSEQIFK HPTQHDNHRP TPAQQMFKNP QEHNNHRQQQ  180
NKVLPQEGTT KTVSILSRAP CLHYGGSGNA VQQQKVSKPT PMEQIRNQSQ PLKREHHNLV  240
LPQEDAKKGT NRVHSIDHGK APCLQYAGPG NAMQQQSSRP ALPQQIKNPP QPPKHQHTEV  300
LRQEDGNRTY RVEPVDRRNN NYHNTTYDES AFQRRGTQDA KTHQHGSSGQ PHAHGDSQWH  360
QPLRPRIQDF SSRNQEGDYR DHRQTTREQY NPQERHHHNQ HGRGQMIQEQ YQPQKIHHQN  420
EHDSWRMNQN QYHPQENHHQ NGHDSWRMNH NQYHPQENHH QNYRYTQQFP APKMCRYYQQ  480
GLRCPYEGNC KFSHGS